Please use this identifier to cite or link to this item:
http://doi.org/10.25358/openscience-9185
Authors: | Jung, Sascha Vatheuer, Helge Czodrowski, Paul |
Title: | VSFlow : an open-source ligand-based virtual screening tool |
Online publication date: | 15-Jun-2023 |
Year of first publication: | 2023 |
Language: | english |
Abstract: | Ligand-based virtual screening is a widespread method in modern drug design. It allows for a rapid screening of large compound databases in order to identify similar structures. Here we report an open-source command line tool which includes a substructure-, fingerprint- and shape-based virtual screening. Most of the implemented features fully rely on the RDKit cheminformatics framework. VSFlow accepts a wide range of input file formats and is highly customizable. Additionally, a quick visualization of the screening results as pdf and/or pymol file is supported. |
DDC: | 540 Chemie 540 Chemistry and allied sciences |
Institution: | Johannes Gutenberg-Universität Mainz |
Department: | FB 09 Chemie, Pharmazie u. Geowissensch. |
Place: | Mainz |
ROR: | https://ror.org/023b0x485 |
DOI: | http://doi.org/10.25358/openscience-9185 |
Version: | Published version |
Publication type: | Zeitschriftenaufsatz |
Document type specification: | Scientific article |
License: | CC BY |
Information on rights of use: | https://creativecommons.org/licenses/by/4.0/ |
Journal: | Journal of Cheminformatics 15 |
Pages or article number: | 40 |
Publisher: | Springer Nature |
Publisher place: | London |
Issue date: | 2023 |
ISSN: | 1758-2946 |
Publisher DOI: | 10.1186/s13321-023-00703-1 |
Appears in collections: | DFG-491381577-G |
Files in This Item:
File | Description | Size | Format | ||
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vsflow___an_opensource_ligand-20230615150935216.pdf | 3.74 MB | Adobe PDF | View/Open |