Xsurvey : web tool to query the set of homorepeats of all reference proteomes

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dc.contributor.authorAndrade-Navarro, Miguel A.
dc.contributor.authorMier, Pablo
dc.date.accessioned2025-11-21T13:05:23Z
dc.date.issued2025
dc.description.abstractHomorepeats are low complexity regions in protein sequences composed of repetitions of one specific amino acid residue. There is currently no automatic way to compare the set of homorepeats between two or more species. Here we present Xsurvey, a web tool to query the set of homorepeats of 23,150 completely-sequenced proteomes. The polyX usage values can be easily compared visually, which simplifies the interpretation of the results.en_GB
dc.identifier.doihttps://doi.org/10.25358/openscience-13690
dc.identifier.urihttps://openscience.ub.uni-mainz.de/handle/20.500.12030/13711
dc.language.isoeng
dc.rightsCC-BY-4.0
dc.rights.urihttps://creativecommons.org/licenses/by/4.0/
dc.subject.ddc570 Biowissenschaftende_DE
dc.subject.ddc570 Life sciencesen_GB
dc.titleXsurvey : web tool to query the set of homorepeats of all reference proteomesen_GB
dc.typeZeitschriftenaufsatzde_DE
jgu.apc.membershipCopernicus COP
jgu.apc.netprice2219,95
jgu.apc.price2641,74
jgu.apc.taxrate19
jgu.dfg.year2025
jgu.identifier.uuidedcc18fe-429a-4d81-9466-84b9bcfd494f
jgu.journal.issue4
jgu.journal.titleIEEE transactions on computational biology and bioinformatics
jgu.journal.volume22
jgu.nationalcurrency.usd2495,00
jgu.organisation.departmentFB 10 Biologiede_DE
jgu.organisation.nameJohannes Gutenberg-Universität Mainzde_DE
jgu.organisation.number7970
jgu.organisation.placeMainz
jgu.organisation.rorhttps://ror.org/023b0x485
jgu.pages.end1480
jgu.pages.start1479
jgu.publisher.doi10.1109/TCBBIO.2025.3557503
jgu.publisher.eissn2998-4165
jgu.publisher.nameIEEE
jgu.publisher.placeNew York, NY
jgu.publisher.year2025
jgu.rights.accessrightsopenAccessen_GB
jgu.subject.ddccode570
jgu.subject.dfgLebenswissenschaftende_DE
jgu.type.dinitypeArticleen_GB
jgu.type.resourceTexten_GB
jgu.type.versionPublished versionen_GB

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