RNase H1 and Sen1 ensure that transient TERRA R-loops promote the repair of short telomeres

Abstract

Telomere repeat-containing RNA (TERRA) is transcribed at telomeres and forms RNA–DNA hybrids. In budding yeast, the presence of RNA–DNA hybrids at short telomeres promotes homology-directed repair (HDR) and prevents accelerated replicative senescence. RNA–DNA hybrids at telomeres have also been demonstrated to prevent 5′end resection, an essential step for HDR. In accordance, we now demonstrate that, not only the presence, but also the removal, of RNA–DNA hybrids drives HDR at shortened telomeres during replicative senescence. Although RNase H2 is absent from short telomeres, it is quickly compensated for by the recruitment of RNase H1 and Sen1. The recruitment of RNase H1 is essential to allow for the loading of Rad51, consistent with the notion that RNA–DNA hybrids prevent Exo1-mediated end resection. In the absence of RNase H1 or Sen1 function, yeast cultures prematurely enter replicative senescence in the absence of telomerase. Furthermore, the delayed senescence phenotype observed when RNase H2 is deleted, depends on the presence of RNase H1 and Sen1. This study demonstrates the importance of transient RNA–DNA hybrids at short telomeres to regulate senescence.